Publications
Science (New York, N.Y.)Jun 2024 |
384
(
6700
),
eadk0775
DOI:
10.1126/science.adk0775

Defining the KRAS- and ERK-dependent transcriptome in KRAS-mutant cancers

Klomp, Jeffrey A; Klomp, Jennifer E; Stalnecker, Clint A; Bryant, Kirsten L; Edwards, A Cole; Drizyte-Miller, Kristina; Hibshman, Priya S; Diehl, J Nathaniel; Lee, Ye S; Morales, Alexis J; Taylor, Khalilah E; Peng, Sen; Tran, Nhan L; Herring, Laura E; Prevatte, Alex W; Barker, Natalie K; Hover, Laura D; Hallin, Jill; Chowdhury, Saikat; Coker, Oluwadara; Lee, Hey Min; Goodwin, Craig M; Gautam, Prson; Olson, Peter; Christensen, James G; Shen, John P; Kopetz, Scott; Graves, Lee M; Lim, Kian-Huat; Wang-Gillam, Andrea; Wennerberg, Krister; Cox, Adrienne D; Der, Channing J
Product Used
Variant Libraries
Abstract
How the KRAS oncogene drives cancer growth remains poorly understood. Therefore, we established a systemwide portrait of KRAS- and extracellular signal-regulated kinase (ERK)-dependent gene transcription in KRAS-mutant cancer to delineate the molecular mechanisms of growth and of inhibitor resistance. Unexpectedly, our KRAS-dependent gene signature diverges substantially from the frequently cited Hallmark KRAS signaling gene signature, is driven predominantly through the ERK mitogen-activated protein kinase (MAPK) cascade, and accurately reflects KRAS- and ERK-regulated gene transcription in KRAS-mutant cancer patients. Integration with our ERK-regulated phospho- and total proteome highlights ERK deregulation of the anaphase promoting complex/cyclosome (APC/C) and other components of the cell cycle machinery as key processes that drive pancreatic ductal adenocarcinoma (PDAC) growth. Our findings elucidate mechanistically the critical role of ERK in driving KRAS-mutant tumor growth and in resistance to KRAS-ERK MAPK targeted therapies.
Product Used
Variant Libraries

Related Publications