Publications
Cancer cellMay 2025 DOI:
10.1016/j.ccell.2025.04.009

Immunosequencing identifies signatures of T cell responses for early detection of nasopharyngeal carcinoma

Zhang, Shanshan; Zhou, Yan; Liu, Zhonghua; Wang, Yuqian; Zhou, Xiang; Chen, Haiwen; Zhang, Xinyu; Chen, Yanhong; Feng, Qisheng; Ye, Xiaoping; Xie, Shanghang; Zeng, Mu-Sheng; Zhai, Weiwei; Zeng, Yi-Xin; Cao, Sumei; Li, Guideng; Xu, Miao
Product Used
Variant Libraries
Abstract
To identify nasopharyngeal carcinoma (NPC)-relevant T cell receptors (TCRs), we profile the repertoires of peripheral blood TCRβ chains from 228 NPC patients, 241 at-risk controls positive for serum Epstein-Barr virus (EBV) VCA-IgA antibody, and 251 seronegative controls. We develop a TCR-based signature (T-score) based on 208 NPC-enriched CDR3β sequences, which accurately diagnoses NPC in both the original and independent validation cohorts. Notably, a higher T-score, associated with a shorter time interval to NPC diagnosis, effectively identifies early-stage NPC among EBV-seropositive at-risk individuals prior to clinical diagnosis. These NPC-enriched TCRs react against not only EBV-specific antigens but also non-EBV antigens expressed by NPC cells, indicating a broad range of specificities. Moreover, the abundance of NPC-enriched CD8+ T cells in blood correlates with the infiltration of non-exhausted T cell counterparts in tumors and predicts prolonged survival, suggesting that these NPC-enriched T cells have significant potential for disease monitoring and therapeutic applications.
Product Used
Variant Libraries

Related Publications