Publications
Molecular cellSep 2025 |
85
(
18
),
3388-3406.e12
DOI:
10.1016/j.molcel.2025.08.025

Requirements for establishment and epigenetic stability of mammalian heterochromatin

Tatarakis, Antonis; Saini, Harleen; Yu, Juntao; Feng, Wenzhi; Pinzon-Arteaga, Carlos A; Moazed, Danesh
Product Used
Oligo Pools
Abstract
Heterochromatic domains of DNA account for a large fraction of mammalian genomes and play critical roles in silencing transposons and genes, but the mechanisms that establish and maintain these domains are not fully understood. Here, we use a CRISPR-based genetic screen to investigate the requirements for establishment and maintenance of histone H3 lysine 9 trimethylation (H3K9me3) heterochromatin. In mouse embryonic stem cells (mESCs), we show that transiently induced H3K9me3 heterochromatin is inherited for a limited number of cell divisions, independently of sequence-dependent recruitment, but becomes stable upon differentiation, concomitant with downregulation of enzymes erasing H3K9me and DNA methylation. In addition, ordered and non-redundant activities of multiple H3K9 and DNA methyltransferases, together with histone deacetylases, chromatin remodeling complexes, and RNA processing factors, are required for heterochromatin maintenance. Our findings suggest that a newly acquired H3K9me3 domain can be maintained like an imprint but requires reinforcement by DNA methylation and other pathways.
Product Used
Oligo Pools

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