Publications
Science immunologyAug 2022 |
7
(
74
),
eabm2077
DOI:
10.1126/sciimmunol.abm2077

Signatures of recent activation identify a circulating T cell compartment containing tumor-specific antigen receptors with high avidity

Purcarea, Anna; Jarosch, Sebastian; Barton, Jack; Grassmann, Simon; Pachmayr, Ludwig; D'Ippolito, Elvira; Hammel, Monika; Hochholzer, Anna; Wagner, Karolin I; van den Berg, Joost H; Buchholz, Veit R; Haanen, John B A G; Busch, Dirk H; Schober, Kilian
Product Used
NGS
Abstract
T cell receptor (TCR) avidity is assumed to be a major determinant of the spatiotemporal fate and protective capacity of tumor-specific T cells. However, monitoring polyclonal T cell responses with known TCR avidities in vivo over space and time remains challenging. Here, we investigated the fate and functionality of tumor neoantigen-specific T cells with TCRs of distinct avidities in a well-established, reductionist preclinical tumor model and human patients with melanoma. To this end, we used polyclonal T cell transfers with in-depth characterized TCRs together with flow cytometric phenotyping in mice inoculated with MC38 OVA tumors. Transfer of T cells from retrogenic mice harboring TCRs with high avidity resulted in best tumor protection. Unexpectedly, we found that both high- and low-avidity T cells are similarly abundant within the tumor and adopt concordant phenotypic signs of exhaustion. Outside the tumor, high-avidity TCR T cells were not generally overrepresented but, instead, selectively enriched in T cell populations with intermediate PD-1 protein expression. Single-cell sequencing of neoantigen-specific T cells from two patients with melanoma-combined with transgenic reexpression of identified TCRs by CRISPR-Cas9-mediated orthotopic TCR replacement-revealed high-functionality TCRs to be enriched in T cells with RNA signatures of recent activation. Furthermore, of 130 surface protein candidates, PD-1 surface expression was most consistently enriched in functional TCRs. Together, our findings show that tumor-reactive TCRs with high protective capacity circulating in peripheral blood are characterized by a signature of recent activation.
Product Used
NGS

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