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Available at SSRN Apr 2024 DOI:
10.2139/ssrn.4807328

Succinate-Mediated Symbiosis between Dialister Hominis and an Uncharacterized Segatella-Like Pectinophile

Makiura, Tomoki; Matsutani, Minenosuke; Tseng, Hou-Chia; Fujimoto, Naoshi; Ohnishi, Akihiro
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Variant Libraries
Abstract
ObjectivesSyntrophy has been documented between pectinophiles and methanol-utilizing bacteria, along with instances of cross-feeding between pectinophiles and methanogens. However, studies on the ecology of pectinophiles in anaerobic digestion (AD) are lacking. Therefore, in this study, we aimed to elucidate the ecology of pectinophiles by isolating novel pectinophile forms and conducting a comprehensive analysis of their physiology and ecology. ・MethodsComplex microbial communities from AD systems were enriched in a pectin-containing medium; subsequently, specific strains were isolated using a pectinophile isolation method. The carbon source assimilation and growth ability of the isolates, along with their symbiotic relationships, were evaluated using batch tests. ・ResultsStrain LPYR103-Pre exhibited 16S rRNA gene sequence similarity and average nucleotide identity values of 94.3% and 77.9%, respectively, when compared to its closest related species, Segatella cerevisiae. Strain LPYR103-Pre demonstrated attenuated growth in the presence of eight common sugars but exhibited remarkably high growth in the presence of pectin, D-galacturonate, and D-glucuronate, with succinate being identified as a primary metabolite. Accumulation of succinate inhibited the growth of strain LPYR103-Pre. However, this impediment was alleviated by Dialister hominis LPYG114-Dih, whose growth required succinate. ・ConclusionsOur results elucidate the specific carbon source requirements of the Segatella-like strain LPYR103-Pre and succinate-mediated symbiosis involving Dialisterhominis. These findings provide new insights into the degradation of pectin and its degradation products during AD, contributing to the identification of unknown pectinophiles.
Product Used
Variant Libraries

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