Publications
bioRxivJul 2023 DOI:
10.1101/2023.07.27.550689

Systematic exploration of prokaryotic form I rubisco maximal carboxylation rates

de Pins, Benoit; Greenspoon, Lior; Bar-On, Yinon M.; Shamshoum, Melina; Ben-Nissan, Roee; Milshtein, Eliya; Davidi, Dan; Sharon, Itai; Mueller-Cajar, Oliver; Noor, Elad; Milo, Ron
Product Used
NGS
Abstract
Autotrophy is the basis for complex life on Earth. Its physiological limits are largely constrained by rubisco - the enzyme that catalyzes almost all carbon fixation on the planet. Yet, with only a small fraction of rubisco diversity kinetically characterized so far, the underlying biological factors driving the evolution of fast rubiscos in nature remain unclear. We conducted a high-throughput kinetic characterization of over 100 prokaryotic form I rubiscos, the most ubiquitous group of rubisco sequences in nature, to uncover the determinants of rubisco’s carboxylation velocity. We show that phototrophy and the presence of a carboxysome CO2concentrating mechanism correlate with faster rubiscos (median rate difference of 3-5 fold). In contrast to previous assumptions, rubiscos originating from α-cyanobacteria exhibit the highest carboxylation rates among form I enzymes (≈10 s-1median versus
Product Used
NGS

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