Publications
Proceedings of the National Academy of Sciences of the United States of AmericaNov 2022 |
119
(
45
),
e2206542119
DOI:
10.1073/pnas.2206542119

Cryo-electron microscopy structure of the H3-H4 octasome: A nucleosome-like particle without histones H2A and H2B

Nozawa, Kayo; Takizawa, Yoshimasa; Pierrakeas, Leonidas; Sogawa-Fujiwara, Chizuru; Saikusa, Kazumi; Akashi, Satoko; Luk, Ed; Kurumizaka, Hitoshi
Product Used
Genes
Abstract
The canonical nucleosome, which represents the major packaging unit of eukaryotic chromatin, has an octameric core composed of two histone H2A-H2B and H3-H4 dimers with ∼147 base pairs (bp) of DNA wrapped around it. Non-nucleosomal particles with alternative histone stoichiometries and DNA wrapping configurations have been found, and they could profoundly influence genome architecture and function. Using cryo-electron microscopy, we solved the structure of the H3-H4 octasome, a nucleosome-like particle with a di-tetrameric core consisting exclusively of the H3 and H4 histones. The core is wrapped by ∼120 bp of DNA in 1.5 negative superhelical turns, forming two stacked disks that are connected by a H4-H4' four-helix bundle. Three conformations corresponding to alternative interdisk angles were observed, indicating the flexibility of the H3-H4 octasome structure. In vivo crosslinking experiments detected histone-histone interactions consistent with the H3-H4 octasome model, suggesting that H3-H4 octasomes or related structural features exist in cells.
Product Used
Genes

Related Publications