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Improve sequencing accuracy and multiplexing with dual indexing adapters

Full-length unique dual indexing (UDI) adapters are designed to enhance next generation sequencing performance by reducing index hopping and sample misassignment. Their optimized structure supports accurate demultiplexing, improved data quality, and confident variant detection. Compatible with a wide range of library preparation workflows, they enable scalable multiplexing and efficient sequencing across research applications.

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Minimize index hopping and cross-talk

Full-length unique dual indexes reduce index misassignment and sample cross-contamination, ensuring accurate demultiplexing and reliable variant detection in multiplexed NGS workflows.

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Increase data quality and confidence

Optimized adapter design supports high-fidelity sequencing with fewer errors, improving downstream analysis for applications such as rare variant detection and low-frequency mutation analysis.

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Scalable for high-throughput sequencing

Supports high levels of multiplexing with a broad index set, enabling efficient sample pooling and cost-effective sequencing across large-scale studies.

Product data

Libraries generated from 300 ng, 75 ng, and 37.5 ng DNA all reach usable concentrations, demonstrating reliable library yield even as input decreases.

 

Estimated library size remains high from 300 ng down to 37.5 ng DNA input, indicating maintained library diversity and strong performance even with lower starting material.

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PCR-free whole genome sequencing libraries maintain strong library yield across low DNA inputs from 37.5 ng to 300 ng using the Twist PCR-Free WGS Library Preparation workflow and Full Length UDI Adapters.
Whole genome sequencing libraries generated with low DNA inputs retain high library diversity and complexity using the Twist PCR-Free WGS Library Preparation Kit and Full Length UDI Adapters.

Reliable library yield, even from low DNA input

Libraries generated from 300 ng, 75 ng, and 37.5 ng DNA all reach usable concentrations, demonstrating reliable library yield even as input decreases.

 

PCR-free whole genome sequencing libraries maintain strong library yield across low DNA inputs from 37.5 ng to 300 ng using the Twist PCR-Free WGS Library Preparation workflow and Full Length UDI Adapters.

Low DNA input has usable library yield. Twist PCR-Free WGS Library Prep Kit libraries with Full Length UDI Adapters for PCR-free WGS were prepared using NA12878 300 ng, 75 ng, and 37.5 ng genomic DNA . Fragmentation parameters were set at 15 minutes and 25°C. Libraries were quantified by qPCR using the Kapa Library Quantification kit.

Library diversity stays high across DNA input levels

Estimated library size remains high from 300 ng down to 37.5 ng DNA input, indicating maintained library diversity and strong performance even with lower starting material.

Whole genome sequencing libraries generated with low DNA inputs retain high library diversity and complexity using the Twist PCR-Free WGS Library Preparation Kit and Full Length UDI Adapters.

Library diversity is maintained even with low DNA input. Twist PCR-Free WGS Library Preparation Kit libraries with Full Length UDI Adapters for PCR-free WGS were prepared using NA12878 300 ng, 75 ng, and 37.5 ng genomic DNA . Fragmentation parameters were set at 15 minutes and 25°C. Libraries were quantified by qPCR using the Kapa Library Quantification kit.

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PCR-free whole genome sequencing libraries maintain strong library yield across low DNA inputs from 37.5 ng to 300 ng using the Twist PCR-Free WGS Library Preparation workflow and Full Length UDI Adapters.

Reliable library yield, even from low DNA input

Libraries generated from 300 ng, 75 ng, and 37.5 ng DNA all reach usable concentrations, demonstrating reliable library yield even as input decreases.

 

Whole genome sequencing libraries generated with low DNA inputs retain high library diversity and complexity using the Twist PCR-Free WGS Library Preparation Kit and Full Length UDI Adapters.

Library diversity stays high across DNA input levels

Estimated library size remains high from 300 ng down to 37.5 ng DNA input, indicating maintained library diversity and strong performance even with lower starting material.

Which adapter system is right for you?

Twist's Adapter Systems improve the performance of any 'T-A' overhang ligation library preparation workflow for next-generation sequencing (NGS) applications. They reduce adapter dimer formation, increase yield, and can eliminate or minimize PCR, improving data quality while lowering sequencing costs. With broad compatibility, high multiplexing (up to 3,072 indexes), and ready-to-use formats, they scale effortlessly from discovery to high-throughput studies. Quality is in our DNA—All Twist adapters are functionally validated to ensure performance and reliability in all NGS applications.

Features

Full Length UDI Adapters

UMI Adapter System

Universal Adapter System

HT Universal Adapter System

Adapter System - Trinity Freestyle

Best for 

PCR-free Whole Genome Sequencing

Improved NGS variant accuracy

Most applications

High throughput applications

Used with the Trinity Fast Hyb Workflow

Contains

Full Length UDI Adapters

UMI Adapers; UDI Primers

Universal Adapters; UDI Primers

Universal Adapters; HT UDI Primers

Universal Adapters compatible with Trinity Freestyle Sequencing; UDI Primers

Unique indexes

1536

16 or 384

16 or 384

3072

384

Index length

10bp

10bp

10bp

12bp

10bp

Available formats

96-well plates

96-well plates

96-well plates

96- or 384-well plates

96-well plates

Sequencer Compatibility

Illumina

Element Cloudbreak Freestyle

Illumina

Element Cloudbreak Freestyle

Illumina

Element Cloudbreak Freestyle

Illumina

Element Cloudbreak Freestyle

Element Trinity Freestyle

Intended Use: For Research Use Only. Not for use in diagnostic procedures.

Performance Disclaimer: Data shown derived from internal testing using NA12878 genomic DNA (300 ng, 75 ng, 37.5 ng) and Kapa® qPCR quantification. Individual library yield, concentration, and diversity results may vary depending on sample quality, input mass, operator technique, and platform instrumentation.

Trademarks: All third-party trademarks, trade names, and product names referenced herein are the property of their respective owners. Illumina® is a registered trademark of Illumina, Inc. Kapa® is a registered trademark of Roche. Element Cloudbreak® and Trinity™ are trademarks of Element Biosciences, Inc. Reference to third-party products or services does not imply endorsement, affiliation, or sponsorship by Twist Bioscience or trademark owners.